Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Gm14057-201ENSMUST00000120631 482 ntBASIC12.76□□□□□ -0.37
Cstf3Q99LI7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Gm29608-201ENSMUST00000190444 463 ntBASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cstf3Q99LI7 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gm19220-201ENSMUST00000222682 803 ntBASIC12.75□□□□□ -0.37
Cstf3Q99LI7 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.75□□□□□ -0.37
Cstf3Q99LI7 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cstf3Q99LI7 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.74□□□□□ -0.37
Cstf3Q99LI7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Gm42612-201ENSMUST00000197986 623 ntBASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Gm43170-201ENSMUST00000199827 612 ntBASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms