Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Gm37008-201ENSMUST00000195712 319 ntBASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.02□□□□□ -0.33
Clcc1Q99LI2 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Clcc1Q99LI2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Gm13123-201ENSMUST00000122173 492 ntBASIC13.01□□□□□ -0.33
Clcc1Q99LI2 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Clcc1Q99LI2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Clcc1Q99LI2 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Clcc1Q99LI2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm22018-201ENSMUST00000104357 131 ntBASIC13□□□□□ -0.33
Clcc1Q99LI2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm16202-201ENSMUST00000117532 544 ntBASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13□□□□□ -0.33
Clcc1Q99LI2 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm43179-201ENSMUST00000198797 275 ntBASIC13□□□□□ -0.33
Clcc1Q99LI2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13□□□□□ -0.33
Clcc1Q99LI2 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13□□□□□ -0.33
Clcc1Q99LI2 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Clcc1Q99LI2 Gm43273-201ENSMUST00000199649 2594 ntBASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms