Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RtcbQ99LF4 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC16.17■□□□□ 0.18
RtcbQ99LF4 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC16.17■□□□□ 0.18
RtcbQ99LF4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RtcbQ99LF4 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RtcbQ99LF4 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RtcbQ99LF4 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RtcbQ99LF4 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RtcbQ99LF4 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RtcbQ99LF4 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gm4864-201ENSMUST00000219894 1461 ntBASIC16.16■□□□□ 0.18
RtcbQ99LF4 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC16.16■□□□□ 0.18
RtcbQ99LF4 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gm28182-201ENSMUST00000188354 2477 ntBASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Mir1943-201ENSMUST00000158276 73 ntBASIC16.16■□□□□ 0.18
RtcbQ99LF4 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Mir7032-201ENSMUST00000185154 79 ntBASIC16.16■□□□□ 0.18
RtcbQ99LF4 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gm38804-201ENSMUST00000203998 767 ntTSL 3 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Gm14267-206ENSMUST00000226870 1209 ntBASIC16.16■□□□□ 0.18
RtcbQ99LF4 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RtcbQ99LF4 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12616-201ENSMUST00000118594 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12624-201ENSMUST00000177615 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12621-201ENSMUST00000177760 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12615-201ENSMUST00000177970 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12622-201ENSMUST00000177975 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12627-201ENSMUST00000178412 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12625-201ENSMUST00000179122 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12614-201ENSMUST00000179586 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm12613-201ENSMUST00000180323 382 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm45925-201ENSMUST00000218882 744 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm18556-201ENSMUST00000219748 1031 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm10676-201ENSMUST00000098778 3221 ntBASIC16.15■□□□□ 0.18
RtcbQ99LF4 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.15■□□□□ 0.18
RtcbQ99LF4 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RtcbQ99LF4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm45495-201ENSMUST00000200940 1700 ntBASIC16.14■□□□□ 0.17
RtcbQ99LF4 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm16481-201ENSMUST00000119074 1227 ntBASIC16.14■□□□□ 0.17
RtcbQ99LF4 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm29237-201ENSMUST00000186216 448 ntTSL 5 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm37201-201ENSMUST00000191845 523 ntBASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC16.14■□□□□ 0.17
RtcbQ99LF4 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms