Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Lims1Q99JW4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Lims1Q99JW4 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm11524-201ENSMUST00000119349 807 ntBASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm15487-201ENSMUST00000122373 465 ntBASIC12.02□□□□□ -0.49
Lims1Q99JW4 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm5279-201ENSMUST00000199575 745 ntBASIC12.02□□□□□ -0.49
Lims1Q99JW4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.02□□□□□ -0.49
Lims1Q99JW4 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.02□□□□□ -0.49
Lims1Q99JW4 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.02□□□□□ -0.49
Lims1Q99JW4 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Lims1Q99JW4 Gm6210-201ENSMUST00000204734 1942 ntBASIC12.01□□□□□ -0.49
Lims1Q99JW4 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gm42840-201ENSMUST00000200303 2251 ntBASIC12.01□□□□□ -0.49
Lims1Q99JW4 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gm6447-201ENSMUST00000118905 835 ntBASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gm5745-201ENSMUST00000183748 313 ntBASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gm29667-201ENSMUST00000190817 490 ntBASIC12.01□□□□□ -0.49
Lims1Q99JW4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 AC140375.2-201ENSMUST00000225283 584 ntBASIC12.01□□□□□ -0.49
Lims1Q99JW4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Lims1Q99JW4 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12□□□□□ -0.49
Lims1Q99JW4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC12□□□□□ -0.49
Lims1Q99JW4 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Lims1Q99JW4 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms