Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rfc4Q99J62 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gm2606-201ENSMUST00000100754 1002 ntBASIC15.13■□□□□ 0.01
Rfc4Q99J62 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gm31256-201ENSMUST00000194705 506 ntBASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gm7293-201ENSMUST00000216682 1007 ntBASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.13■□□□□ 0.01
Rfc4Q99J62 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.13■□□□□ 0.01
Rfc4Q99J62 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Gm43289-201ENSMUST00000200537 1475 ntBASIC15.13■□□□□ 0.01
Rfc4Q99J62 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC15.13■□□□□ 0.01
Rfc4Q99J62 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Gm14017-201ENSMUST00000121934 386 ntBASIC15.12■□□□□ 0.01
Rfc4Q99J62 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.12■□□□□ 0.01
Rfc4Q99J62 Nsd1-205ENSMUST00000224693 852 ntBASIC15.12■□□□□ 0.01
Rfc4Q99J62 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.12■□□□□ 0.01
Rfc4Q99J62 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.12■□□□□ 0.01
Rfc4Q99J62 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.12■□□□□ 0.01
Rfc4Q99J62 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
Rfc4Q99J62 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Rfc4Q99J62 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.11■□□□□ 0.01
Rfc4Q99J62 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Rfc4Q99J62 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Rfc4Q99J62 Gm8176-201ENSMUST00000191297 1099 ntBASIC15.11■□□□□ 0.01
Rfc4Q99J62 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms