Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm24694-201ENSMUST00000180054 110 ntBASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm27663-201ENSMUST00000184839 110 ntBASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm43094-201ENSMUST00000196549 921 ntBASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm5279-201ENSMUST00000199575 745 ntBASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm24447-201ENSMUST00000083977 338 ntBASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb4Q91XZ6 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Gm15678-201ENSMUST00000117573 960 ntBASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Gm12485-201ENSMUST00000119641 291 ntBASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Mir7023-201ENSMUST00000185093 64 ntBASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhb4Q91XZ6 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm15321-201ENSMUST00000121290 288 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm12403-201ENSMUST00000121384 959 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Gm5161-201ENSMUST00000075243 853 ntBASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhb4Q91XZ6 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms