Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Proscos-202ENSMUST00000178990 666 ntBASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ddx41Q91VN6 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm12403-201ENSMUST00000121384 959 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm8810-201ENSMUST00000172895 754 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm29608-201ENSMUST00000190444 463 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm37424-201ENSMUST00000191727 561 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm38144-201ENSMUST00000192790 465 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Itm2b-204ENSMUST00000228637 783 ntBASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ddx41Q91VN6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Gm13392-201ENSMUST00000117708 150 ntBASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Gm6007-201ENSMUST00000208170 823 ntBASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ddx41Q91VN6 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ddx41Q91VN6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms