Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.05□□□□□ -0.64
H1fooQ8VIK3 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Syt7-205ENSMUST00000224135 1557 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 AC125206.2-201ENSMUST00000217454 574 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
H1fooQ8VIK3 AC137842.1-201ENSMUST00000227896 2064 ntBASIC11.04□□□□□ -0.64
H1fooQ8VIK3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms