Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.84□□□□□ -0.35
Vps4aQ8VEJ9 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Vps4aQ8VEJ9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.83□□□□□ -0.35
Vps4aQ8VEJ9 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.35
Vps4aQ8VEJ9 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Gm12957-201ENSMUST00000117835 377 ntBASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Vps4aQ8VEJ9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Gm15770-201ENSMUST00000117498 584 ntBASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Gm45331-201ENSMUST00000209868 554 ntBASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Gm45242-201ENSMUST00000210666 2129 ntBASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Vps4aQ8VEJ9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms