Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm43339-201ENSMUST00000200032 1606 ntBASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Rpa1Q8VEE4 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm13385-201ENSMUST00000121089 220 ntBASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Mir7221-201ENSMUST00000184009 72 ntBASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm21470-201ENSMUST00000187680 696 ntBASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.3□□□□□ -0.28
Rpa1Q8VEE4 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm4995-201ENSMUST00000117247 432 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm15770-201ENSMUST00000117498 584 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm15460-201ENSMUST00000118147 391 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm6736-201ENSMUST00000166583 948 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm45841-201ENSMUST00000207700 164 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gm16476-201ENSMUST00000221544 139 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Rpa1Q8VEE4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Rpa1Q8VEE4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 89.7 ms