Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rpap2Q8VC34 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm5385-201ENSMUST00000118988 1559 ntBASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm11618-201ENSMUST00000117946 267 ntBASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC14.44□□□□□ -0.1
Rpap2Q8VC34 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm5035-201ENSMUST00000215581 927 ntBASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm38094-201ENSMUST00000195864 2978 ntBASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.44□□□□□ -0.1
Rpap2Q8VC34 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm11803-201ENSMUST00000119966 444 ntBASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm8810-201ENSMUST00000172895 754 ntBASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm24196-201ENSMUST00000179161 110 ntBASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm27486-201ENSMUST00000184923 80 ntBASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm38297-201ENSMUST00000195122 1057 ntBASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpap2Q8VC34 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.42□□□□□ -0.1
Rpap2Q8VC34 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpap2Q8VC34 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms