Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Ccdc9Q8VC31 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Gm44758-201ENSMUST00000206096 2068 ntBASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Ccdc9Q8VC31 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Gm27628-201ENSMUST00000184911 107 ntBASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Gm9182-201ENSMUST00000217829 639 ntBASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 AC154639.1-201ENSMUST00000224393 2849 ntBASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 Mrvi1-201ENSMUST00000005751 6198 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ccdc9Q8VC31 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gm13294-201ENSMUST00000121757 1330 ntBASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ccdc9Q8VC31 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms