Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Ccdc58Q8R3Q6 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Ccdc58Q8R3Q6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Gm8927-201ENSMUST00000181978 981 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Gm4804-201ENSMUST00000182234 999 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Gm6283-201ENSMUST00000182369 1000 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Gm21470-201ENSMUST00000187680 696 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Gm3222-201ENSMUST00000071282 990 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Ccdc58Q8R3Q6 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm13332-201ENSMUST00000120451 1398 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm15460-201ENSMUST00000118147 391 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm15653-201ENSMUST00000119247 907 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm15467-201ENSMUST00000120582 445 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm24420-201ENSMUST00000176676 59 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm29541-201ENSMUST00000191351 678 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm5425-201ENSMUST00000214125 459 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 AC124751.1-201ENSMUST00000222716 1408 ntBASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms