Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Clrn1Q8K445 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gm6447-201ENSMUST00000118905 835 ntBASIC12.43□□□□□ -0.42
Clrn1Q8K445 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Ighv5-13-201ENSMUST00000193550 290 ntBASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.43□□□□□ -0.42
Clrn1Q8K445 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.43□□□□□ -0.42
Clrn1Q8K445 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Clrn1Q8K445 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm12138-201ENSMUST00000122180 951 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm6152-201ENSMUST00000151704 340 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Mir7221-201ENSMUST00000184009 72 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.42□□□□□ -0.42
Clrn1Q8K445 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.42□□□□□ -0.42
Clrn1Q8K445 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Clrn1Q8K445 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms