Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rtn1Q8K0T0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Gm8810-201ENSMUST00000172895 754 ntBASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Gm8652-201ENSMUST00000181363 964 ntBASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rtn1Q8K0T0 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rtn1Q8K0T0 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Gm10156-201ENSMUST00000122364 462 ntBASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Gm27839-201ENSMUST00000184242 106 ntBASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rtn1Q8K0T0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm11618-201ENSMUST00000117946 267 ntBASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm8213-201ENSMUST00000118191 441 ntBASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rtn1Q8K0T0 Gm24196-201ENSMUST00000179161 110 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms