Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm15806-201ENSMUST00000120696 955 ntBASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm11424-201ENSMUST00000121929 829 ntBASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm9002-201ENSMUST00000178437 499 ntBASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Gm6198-201ENSMUST00000191337 2929 ntBASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rfwd3Q8CIK8 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Gm18473-201ENSMUST00000220543 868 ntBASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rfwd3Q8CIK8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfwd3Q8CIK8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfwd3Q8CIK8 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfwd3Q8CIK8 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfwd3Q8CIK8 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfwd3Q8CIK8 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rfwd3Q8CIK8 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Mir692-1-201ENSMUST00000102263 109 ntBASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rfwd3Q8CIK8 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms