Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.83□□□□□ -0.04
Syne4Q8CII8 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.83□□□□□ -0.04
Syne4Q8CII8 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 AC123665.1-201ENSMUST00000228204 438 ntBASIC14.83□□□□□ -0.04
Syne4Q8CII8 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Syne4Q8CII8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gm12058-201ENSMUST00000118614 437 ntBASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gm44405-201ENSMUST00000198952 126 ntBASIC14.82□□□□□ -0.04
Syne4Q8CII8 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.82□□□□□ -0.04
Syne4Q8CII8 Gm8712-201ENSMUST00000221090 701 ntBASIC14.82□□□□□ -0.04
Syne4Q8CII8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Syne4Q8CII8 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.82□□□□□ -0.04
Syne4Q8CII8 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Syne4Q8CII8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Gm25043-201ENSMUST00000158604 212 ntBASIC14.81□□□□□ -0.04
Syne4Q8CII8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.81□□□□□ -0.04
Syne4Q8CII8 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Syne4Q8CII8 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm8856-201ENSMUST00000185254 1144 ntBASIC14.8□□□□□ -0.04
Syne4Q8CII8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC14.8□□□□□ -0.04
Syne4Q8CII8 Gm38092-201ENSMUST00000195600 653 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms