Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.48□□□□□ -0.25
CopaQ8CIE6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.48□□□□□ -0.25
CopaQ8CIE6 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CopaQ8CIE6 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.47□□□□□ -0.25
CopaQ8CIE6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 AY702102-202ENSMUST00000194651 1173 ntBASIC13.47□□□□□ -0.25
CopaQ8CIE6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.47□□□□□ -0.25
CopaQ8CIE6 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.47□□□□□ -0.25
CopaQ8CIE6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CopaQ8CIE6 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Gm27486-201ENSMUST00000184923 80 ntBASIC13.46□□□□□ -0.25
CopaQ8CIE6 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Gm6983-201ENSMUST00000214912 628 ntBASIC13.46□□□□□ -0.25
CopaQ8CIE6 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.46□□□□□ -0.25
CopaQ8CIE6 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CopaQ8CIE6 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CopaQ8CIE6 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC13.46□□□□□ -0.26
CopaQ8CIE6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CopaQ8CIE6 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CopaQ8CIE6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CopaQ8CIE6 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CopaQ8CIE6 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.45□□□□□ -0.26
CopaQ8CIE6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.45□□□□□ -0.26
CopaQ8CIE6 Mir1982-201ENSMUST00000157368 74 ntBASIC13.45□□□□□ -0.26
CopaQ8CIE6 Gm8652-201ENSMUST00000181363 964 ntBASIC13.45□□□□□ -0.26
CopaQ8CIE6 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms