Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Gm44094-201ENSMUST00000204703 2030 ntBASIC16.29■□□□□ 0.2
Smc5Q8CG46 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smc5Q8CG46 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm44758-201ENSMUST00000206096 2068 ntBASIC16.28■□□□□ 0.2
Smc5Q8CG46 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm37391-201ENSMUST00000194891 2318 ntBASIC16.28■□□□□ 0.2
Smc5Q8CG46 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC16.28■□□□□ 0.2
Smc5Q8CG46 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm15321-201ENSMUST00000121290 288 ntBASIC16.28■□□□□ 0.2
Smc5Q8CG46 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm27838-201ENSMUST00000184829 128 ntBASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gm44942-201ENSMUST00000096093 2072 ntBASIC16.28■□□□□ 0.2
Smc5Q8CG46 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smc5Q8CG46 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm44292-201ENSMUST00000205194 2364 ntBASIC16.27■□□□□ 0.2
Smc5Q8CG46 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm24694-201ENSMUST00000180054 110 ntBASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm27663-201ENSMUST00000184839 110 ntBASIC16.27■□□□□ 0.2
Smc5Q8CG46 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm42550-201ENSMUST00000201553 960 ntBASIC16.27■□□□□ 0.2
Smc5Q8CG46 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Smc5Q8CG46 Gm7049-201ENSMUST00000223520 1712 ntBASIC16.27■□□□□ 0.19
Smc5Q8CG46 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Smc5Q8CG46 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc5Q8CG46 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Smc5Q8CG46 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc5Q8CG46 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Smc5Q8CG46 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Gm13689-201ENSMUST00000119360 685 ntBASIC16.26■□□□□ 0.19
Smc5Q8CG46 Gm14719-201ENSMUST00000121891 340 ntBASIC16.26■□□□□ 0.19
Smc5Q8CG46 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smc5Q8CG46 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC16.26■□□□□ 0.19
Smc5Q8CG46 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.26■□□□□ 0.19
Smc5Q8CG46 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms