Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc28bQ8CEG5 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc28bQ8CEG5 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.02□□□□□ -0.32
Ccdc28bQ8CEG5 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc28bQ8CEG5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc28bQ8CEG5 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Ccdc28bQ8CEG5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Ccdc28bQ8CEG5 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Gm11779-201ENSMUST00000118541 368 ntBASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Gm5425-201ENSMUST00000214125 459 ntBASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Ccdc28bQ8CEG5 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm22065-201ENSMUST00000103753 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm22066-201ENSMUST00000103761 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24932-201ENSMUST00000103763 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24115-201ENSMUST00000103799 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm22190-201ENSMUST00000103827 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm22191-201ENSMUST00000103831 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24721-201ENSMUST00000103849 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm28018-201ENSMUST00000103869 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm26399-201ENSMUST00000103937 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm25349-201ENSMUST00000177728 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm23616-201ENSMUST00000177797 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm25871-201ENSMUST00000177816 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24752-201ENSMUST00000178240 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24496-201ENSMUST00000178287 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm25649-201ENSMUST00000178476 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm25548-201ENSMUST00000178681 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm23147-201ENSMUST00000178841 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm26095-201ENSMUST00000179270 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm22171-201ENSMUST00000179283 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm23936-201ENSMUST00000179354 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm22619-201ENSMUST00000179516 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm25255-201ENSMUST00000179579 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24755-201ENSMUST00000179691 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm26506-201ENSMUST00000179692 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm25086-201ENSMUST00000179931 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm23243-201ENSMUST00000180047 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24659-201ENSMUST00000180212 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm24169-201ENSMUST00000180244 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm23689-201ENSMUST00000180354 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm27359-201ENSMUST00000184153 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm27785-201ENSMUST00000184268 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm27466-201ENSMUST00000184396 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Gm27703-201ENSMUST00000184836 110 ntBASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Ccdc28bQ8CEG5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms