Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.19□□□□□ -0.14
Vcpip1Q8CDG3 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vcpip1Q8CDG3 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Gm7114-201ENSMUST00000190159 1789 ntBASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vcpip1Q8CDG3 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 AC125108.1-201ENSMUST00000218986 2330 ntBASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm11478-201ENSMUST00000117851 599 ntBASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm28760-201ENSMUST00000185995 736 ntBASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm6218-201ENSMUST00000219812 628 ntBASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm45643-201ENSMUST00000211364 1484 ntBASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vcpip1Q8CDG3 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Gm15163-201ENSMUST00000120749 1302 ntBASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Gm23984-201ENSMUST00000157139 203 ntBASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Gm8515-201ENSMUST00000194852 576 ntBASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Rnf17-202ENSMUST00000223627 2077 ntBASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vcpip1Q8CDG3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vcpip1Q8CDG3 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms