Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Vps53Q8CCB4 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 AC159896.2-201ENSMUST00000214753 269 ntBASIC15.34■□□□□ 0.05
Vps53Q8CCB4 AC154319.1-201ENSMUST00000216330 312 ntBASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 AL589735.1-201ENSMUST00000224353 270 ntBASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Vps53Q8CCB4 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Grk6-205ENSMUST00000224653 2976 ntBASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.33■□□□□ 0.05
Vps53Q8CCB4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Gm37324-201ENSMUST00000194500 4504 ntBASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Vps53Q8CCB4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Mir1247-201ENSMUST00000116706 82 ntBASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Gm42829-201ENSMUST00000198417 2585 ntBASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.32■□□□□ 0.04
Vps53Q8CCB4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms