Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Lysmd4Q8CC84 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Gm17870-201ENSMUST00000219489 1174 ntBASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.82□□□□□ -0.52
Lysmd4Q8CC84 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Gm6736-201ENSMUST00000166583 948 ntBASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 AC151286.1-201ENSMUST00000198489 145 ntBASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 AC132104.2-201ENSMUST00000215011 266 ntBASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Gm37391-201ENSMUST00000194891 2318 ntBASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.81□□□□□ -0.52
Lysmd4Q8CC84 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 AC159195.1-201ENSMUST00000225867 2086 ntBASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Lysmd4Q8CC84 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms