Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Alx1Q8C8B0 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Alx1Q8C8B0 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Alx1Q8C8B0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Alx1Q8C8B0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm5187-201ENSMUST00000117317 991 ntBASIC15.33■□□□□ 0.04
Alx1Q8C8B0 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm45706-201ENSMUST00000213063 2136 ntBASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Gm9200-201ENSMUST00000118513 1354 ntBASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Alx1Q8C8B0 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Gm38157-201ENSMUST00000194178 1698 ntBASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Gm25927-201ENSMUST00000175058 117 ntBASIC15.32■□□□□ 0.04
Alx1Q8C8B0 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Gm44851-201ENSMUST00000205735 2309 ntBASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Alx1Q8C8B0 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm14704-201ENSMUST00000120300 874 ntBASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Alx1Q8C8B0 AC151895.1-201ENSMUST00000219025 1742 ntBASIC15.31■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms