Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trim35Q8C006 Gm44441-201ENSMUST00000203642 2475 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Trim35Q8C006 CT025548.2-201ENSMUST00000226227 1329 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim35Q8C006 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm25848-201ENSMUST00000116790 144 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm14710-201ENSMUST00000146082 1066 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.44□□□□□ -0.1
Trim35Q8C006 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Mir6990-201ENSMUST00000183724 91 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm43805-201ENSMUST00000198488 824 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm44137-201ENSMUST00000203670 367 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm45889-201ENSMUST00000209535 1057 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim35Q8C006 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim35Q8C006 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Trim35Q8C006 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm37761-201ENSMUST00000194989 2098 ntBASIC14.44□□□□□ -0.1
Trim35Q8C006 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.44□□□□□ -0.1
Trim35Q8C006 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trim35Q8C006 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Trim35Q8C006 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm17791-201ENSMUST00000185660 1501 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Cetn2-202ENSMUST00000114550 1124 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm15488-201ENSMUST00000121682 670 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Cd63-ps-202ENSMUST00000154992 717 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm29409-202ENSMUST00000189623 901 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm33112-201ENSMUST00000193971 699 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm37072-201ENSMUST00000194570 837 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm44335-201ENSMUST00000196879 141 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm44297-201ENSMUST00000198304 141 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm44346-201ENSMUST00000198851 141 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm44865-201ENSMUST00000207240 531 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm18645-201ENSMUST00000209593 651 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm45800-201ENSMUST00000210331 700 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Trim35Q8C006 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC14.43□□□□□ -0.1
Trim35Q8C006 AC123738.1-201ENSMUST00000224796 773 ntBASIC14.43□□□□□ -0.1
Trim35Q8C006 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim35Q8C006 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms