Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Ube3dQ8BX13 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm12485-201ENSMUST00000119641 291 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm15376-201ENSMUST00000122258 783 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm26464-201ENSMUST00000157094 305 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Ube3dQ8BX13 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm14730-201ENSMUST00000122378 1045 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm7498-201ENSMUST00000203282 1084 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm19324-201ENSMUST00000213229 1169 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Gm5356-201ENSMUST00000093326 615 ntBASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Ube3dQ8BX13 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms