Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Mir7684-201ENSMUST00000183858 60 ntBASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm27838-201ENSMUST00000184829 128 ntBASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm29667-201ENSMUST00000190817 490 ntBASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm9797-201ENSMUST00000052902 613 ntBASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cpne3Q8BT60 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Gm21854-201ENSMUST00000179901 471 ntBASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cpne3Q8BT60 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm12403-201ENSMUST00000121384 959 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm4335-201ENSMUST00000182581 1004 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm43094-201ENSMUST00000196549 921 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cpne3Q8BT60 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms