Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdhr3Q8BL00 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm38144-201ENSMUST00000192790 465 ntBASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm43575-201ENSMUST00000196420 516 ntBASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cdhr3Q8BL00 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cdhr3Q8BL00 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Cdhr3Q8BL00 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms