Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc40Q8BI79 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm37014-201ENSMUST00000194723 2253 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm44086-201ENSMUST00000203251 2349 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm12485-201ENSMUST00000119641 291 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm25927-201ENSMUST00000175058 117 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm5161-201ENSMUST00000075243 853 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm24447-201ENSMUST00000083977 338 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm38376-201ENSMUST00000195493 2253 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc40Q8BI79 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc40Q8BI79 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms