Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Gm12015-201ENSMUST00000117065 843 ntBASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Gm5070-201ENSMUST00000177599 862 ntBASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Gm32999-201ENSMUST00000192693 562 ntBASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 AC108416.1-202ENSMUST00000228927 1201 ntBASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Gm43081-201ENSMUST00000199082 1380 ntBASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trnp1Q80ZI1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gm24845-201ENSMUST00000158034 109 ntBASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gm8018-201ENSMUST00000173536 789 ntBASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gm17812-201ENSMUST00000204935 318 ntBASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 AC166344.1-202ENSMUST00000224139 234 ntBASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Trnp1Q80ZI1 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Trnp1Q80ZI1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trnp1Q80ZI1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trnp1Q80ZI1 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trnp1Q80ZI1 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gm13813-201ENSMUST00000120998 787 ntBASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gm14832-201ENSMUST00000121289 322 ntBASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC14.7□□□□□ -0.06
Trnp1Q80ZI1 Gm44545-201ENSMUST00000208262 746 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms