Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh8Q7TSK3 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Gm18630-201ENSMUST00000222109 1397 ntBASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Gm27514-201ENSMUST00000183692 110 ntBASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Abhd6-203ENSMUST00000225234 1958 ntBASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Gm37133-201ENSMUST00000192705 1922 ntBASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13□□□□□ -0.33
Pcdh8Q7TSK3 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm27682-201ENSMUST00000183930 110 ntBASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Gm10268-201ENSMUST00000085340 555 ntBASIC12.99□□□□□ -0.33
Pcdh8Q7TSK3 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 63.9 ms