Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Gm13286-201ENSMUST00000117750 537 ntBASIC11.1□□□□□ -0.63
Rif1Q6PR54 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rif1Q6PR54 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Mir680-2-201ENSMUST00000102163 110 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm23251-201ENSMUST00000103773 110 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Ighv2-1-201ENSMUST00000170946 353 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 9430078K24Rik-203ENSMUST00000220293 638 ntTSL 3 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm6170-201ENSMUST00000187672 1388 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm13549-201ENSMUST00000118339 796 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm11451-201ENSMUST00000118946 630 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 Gm16081-201ENSMUST00000155992 684 ntTSL 3 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 AY036118-201ENSMUST00000200021 923 ntBASIC11.09□□□□□ -0.63
Rif1Q6PR54 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Rif1Q6PR54 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Rif1Q6PR54 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Rif1Q6PR54 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Gm11941-201ENSMUST00000119904 610 ntBASIC11.08□□□□□ -0.64
Rif1Q6PR54 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Gm22877-201ENSMUST00000175451 105 ntBASIC11.08□□□□□ -0.64
Rif1Q6PR54 Gm29608-201ENSMUST00000190444 463 ntBASIC11.08□□□□□ -0.64
Rif1Q6PR54 Gm36982-201ENSMUST00000193796 1128 ntBASIC11.08□□□□□ -0.64
Rif1Q6PR54 Gm18463-201ENSMUST00000207258 474 ntBASIC11.08□□□□□ -0.64
Rif1Q6PR54 B230209E15Rik-201ENSMUST00000209115 1597 ntTSL 5 BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Rif1Q6PR54 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms