Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Gm19309-201ENSMUST00000218295 205 ntBASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Nudcd1Q6PIP5 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm11637-201ENSMUST00000120601 592 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm13123-201ENSMUST00000122173 492 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm2231-201ENSMUST00000125661 612 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm18054-201ENSMUST00000207539 555 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm10146-201ENSMUST00000072739 309 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm10268-201ENSMUST00000085340 555 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Nudcd1Q6PIP5 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Nudcd1Q6PIP5 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Nudcd1Q6PIP5 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms