Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Gm13097-201ENSMUST00000210722 397 ntBASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Nup98Q6PFD9 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gm12058-201ENSMUST00000118614 437 ntBASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gm15703-201ENSMUST00000120250 880 ntBASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Gm27023-201ENSMUST00000182372 285 ntBASIC15.26■□□□□ 0.03
Nup98Q6PFD9 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Nup98Q6PFD9 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Gm14832-201ENSMUST00000121289 322 ntBASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Gm8494-201ENSMUST00000178171 1233 ntBASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 AC113031.8-201ENSMUST00000227856 631 ntBASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Gm17767-201ENSMUST00000189410 1470 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.25■□□□□ 0.03
Nup98Q6PFD9 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Gm2673-201ENSMUST00000120958 1608 ntBASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Nup98Q6PFD9 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms