Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.02□□□□□ -0.16
CtifQ6PEE2 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CtifQ6PEE2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Auts2-212ENSMUST00000178555 309 ntBASIC14.02□□□□□ -0.17
CtifQ6PEE2 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Gm27397-201ENSMUST00000184997 107 ntBASIC14.02□□□□□ -0.17
CtifQ6PEE2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.02□□□□□ -0.17
CtifQ6PEE2 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.02□□□□□ -0.17
CtifQ6PEE2 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CtifQ6PEE2 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.01□□□□□ -0.17
CtifQ6PEE2 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Gm15173-201ENSMUST00000122049 433 ntBASIC14.01□□□□□ -0.17
CtifQ6PEE2 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Gm24513-201ENSMUST00000174964 138 ntBASIC14.01□□□□□ -0.17
CtifQ6PEE2 Gm19931-201ENSMUST00000198920 368 ntBASIC14.01□□□□□ -0.17
CtifQ6PEE2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.01□□□□□ -0.17
CtifQ6PEE2 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Gm43984-201ENSMUST00000204572 2864 ntBASIC14□□□□□ -0.17
CtifQ6PEE2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Gm14057-201ENSMUST00000120631 482 ntBASIC14□□□□□ -0.17
CtifQ6PEE2 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14□□□□□ -0.17
CtifQ6PEE2 AC122305.4-201ENSMUST00000216159 1206 ntBASIC14□□□□□ -0.17
CtifQ6PEE2 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC14□□□□□ -0.17
CtifQ6PEE2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CtifQ6PEE2 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms