Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm12134-201ENSMUST00000122109 520 ntBASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Gm22121-201ENSMUST00000175148 54 ntBASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Gm34767-201ENSMUST00000191813 1062 ntBASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Snrnp40Q6PE01 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm8228-201ENSMUST00000189949 2192 ntBASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm43399-201ENSMUST00000202546 2374 ntBASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm26361-201ENSMUST00000158868 186 ntBASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm43947-201ENSMUST00000203019 959 ntBASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Snrnp40Q6PE01 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm14208-201ENSMUST00000119645 678 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Snrnp40Q6PE01 Gm22334-201ENSMUST00000158070 133 ntBASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 93.7 ms