Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Mir1247-201ENSMUST00000116706 82 ntBASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Gm5687-201ENSMUST00000118252 640 ntBASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Gm13369-201ENSMUST00000119442 987 ntBASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Gm10156-201ENSMUST00000122364 462 ntBASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hmgb4Q6P8W9 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm1335-201ENSMUST00000121653 386 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm27514-201ENSMUST00000183692 110 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm38144-201ENSMUST00000192790 465 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm43179-201ENSMUST00000198797 275 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm7399-201ENSMUST00000032395 858 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hmgb4Q6P8W9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Gm9823-201ENSMUST00000051212 327 ntBASIC13.8□□□□□ -0.2
Hmgb4Q6P8W9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms