Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.7□□□□□ -0.38
Sdc3Q64519 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sdc3Q64519 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.7□□□□□ -0.38
Sdc3Q64519 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Sdc3Q64519 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.7□□□□□ -0.38
Sdc3Q64519 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm7561-201ENSMUST00000211203 886 ntBASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.7□□□□□ -0.38
Sdc3Q64519 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Sdc3Q64519 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Sdc3Q64519 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm11803-201ENSMUST00000119966 444 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm8810-201ENSMUST00000172895 754 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
Sdc3Q64519 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.69□□□□□ -0.38
Sdc3Q64519 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm18473-201ENSMUST00000220543 868 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Itm2b-204ENSMUST00000228637 783 ntBASIC12.69□□□□□ -0.38
Sdc3Q64519 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Sdc3Q64519 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Sdc3Q64519 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.69□□□□□ -0.38
Sdc3Q64519 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Sdc3Q64519 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Sdc3Q64519 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Mir1982-201ENSMUST00000157368 74 ntBASIC12.68□□□□□ -0.38
Sdc3Q64519 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Sdc3Q64519 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.68□□□□□ -0.38
Sdc3Q64519 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.68□□□□□ -0.38
Sdc3Q64519 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms