Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ss18Q62280 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ss18Q62280 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ss18Q62280 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Ss18Q62280 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Ss18Q62280 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC9.74□□□□□ -0.85
Ss18Q62280 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC9.74□□□□□ -0.85
Ss18Q62280 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Ss18Q62280 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.73□□□□□ -0.85
Ss18Q62280 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Gm13453-201ENSMUST00000118708 357 ntBASIC9.73□□□□□ -0.85
Ss18Q62280 Gm13616-201ENSMUST00000120600 222 ntBASIC9.73□□□□□ -0.85
Ss18Q62280 Gm27772-201ENSMUST00000184900 187 ntBASIC9.73□□□□□ -0.85
Ss18Q62280 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC9.73□□□□□ -0.85
Ss18Q62280 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
Ss18Q62280 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
Ss18Q62280 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Gm13859-201ENSMUST00000119936 1423 ntBASIC9.73□□□□□ -0.85
Ss18Q62280 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
Ss18Q62280 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC9.73□□□□□ -0.85
Ss18Q62280 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Gm13730-201ENSMUST00000121036 1462 ntBASIC9.72□□□□□ -0.85
Ss18Q62280 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC9.72□□□□□ -0.85
Ss18Q62280 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.72□□□□□ -0.85
Ss18Q62280 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC9.72□□□□□ -0.85
Ss18Q62280 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Gm27680-201ENSMUST00000184192 160 ntBASIC9.72□□□□□ -0.85
Ss18Q62280 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC9.72□□□□□ -0.85
Ss18Q62280 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.72□□□□□ -0.85
Ss18Q62280 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Ss18Q62280 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 AC116503.1-201ENSMUST00000215445 2192 ntBASIC9.72□□□□□ -0.85
Ss18Q62280 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Ss18Q62280 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms