Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC17.27■□□□□ 0.35
Gli3Q61602 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gli3Q61602 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Gli3Q61602 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gli3Q61602 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gli3Q61602 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Gli3Q61602 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Gli3Q61602 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.26■□□□□ 0.35
Gli3Q61602 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC17.26■□□□□ 0.35
Gli3Q61602 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Gli3Q61602 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Gm25076-201ENSMUST00000104098 132 ntBASIC17.26■□□□□ 0.35
Gli3Q61602 Gm26013-201ENSMUST00000104404 119 ntBASIC17.26■□□□□ 0.35
Gli3Q61602 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC17.26■□□□□ 0.35
Gli3Q61602 Gm12857-201ENSMUST00000117678 592 ntBASIC17.26■□□□□ 0.35
Gli3Q61602 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC17.26■□□□□ 0.35
Gli3Q61602 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Gm10605-202ENSMUST00000183019 3198 ntBASIC17.26■□□□□ 0.35
Gli3Q61602 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
Gli3Q61602 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC17.26■□□□□ 0.35
Gli3Q61602 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Gli3Q61602 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Gli3Q61602 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Gm5466-201ENSMUST00000119395 1890 ntBASIC17.25■□□□□ 0.35
Gli3Q61602 n-R5s64-201ENSMUST00000102019 119 ntBASIC17.25■□□□□ 0.35
Gli3Q61602 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gli3Q61602 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC17.25■□□□□ 0.35
Gli3Q61602 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gli3Q61602 Gm8531-201ENSMUST00000188319 893 ntBASIC17.25■□□□□ 0.35
Gli3Q61602 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC17.25■□□□□ 0.35
Gli3Q61602 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Gli3Q61602 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.25■□□□□ 0.35
Gli3Q61602 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Gli3Q61602 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC17.25■□□□□ 0.35
Gli3Q61602 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Gli3Q61602 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Gli3Q61602 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gli3Q61602 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Gli3Q61602 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Gm25063-201ENSMUST00000104666 94 ntBASIC17.24■□□□□ 0.35
Gli3Q61602 Gm13019-201ENSMUST00000120000 276 ntBASIC17.24■□□□□ 0.35
Gli3Q61602 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Gm26989-201ENSMUST00000182608 749 ntBASIC17.24■□□□□ 0.35
Gli3Q61602 Gm9645-201ENSMUST00000197131 792 ntBASIC17.24■□□□□ 0.35
Gli3Q61602 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 CT030135.2-201ENSMUST00000225255 893 ntBASIC17.24■□□□□ 0.35
Gli3Q61602 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Gli3Q61602 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC17.24■□□□□ 0.35
Gli3Q61602 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gli3Q61602 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gli3Q61602 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gli3Q61602 Gm5847-201ENSMUST00000178959 1595 ntBASIC17.24■□□□□ 0.35
Gli3Q61602 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gli3Q61602 Gm12030-201ENSMUST00000121917 223 ntBASIC17.23■□□□□ 0.35
Gli3Q61602 n-R5s84-201ENSMUST00000122591 109 ntBASIC17.23■□□□□ 0.35
Gli3Q61602 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC17.23■□□□□ 0.35
Gli3Q61602 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
Gli3Q61602 Gm8343-201ENSMUST00000182705 994 ntBASIC17.23■□□□□ 0.35
Gli3Q61602 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms