Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Mir686-201ENSMUST00000102174 109 ntBASIC13.71□□□□□ -0.21
Smarcd1Q61466 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Gm8062-201ENSMUST00000139696 444 ntBASIC13.71□□□□□ -0.21
Smarcd1Q61466 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Smarcd1Q61466 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd1Q61466 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Smarcd1Q61466 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd1Q61466 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Smarcd1Q61466 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.7□□□□□ -0.22
Smarcd1Q61466 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.7□□□□□ -0.22
Smarcd1Q61466 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.7□□□□□ -0.22
Smarcd1Q61466 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Tyms-ps-201ENSMUST00000219550 915 ntBASIC13.7□□□□□ -0.22
Smarcd1Q61466 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.7□□□□□ -0.22
Smarcd1Q61466 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.7□□□□□ -0.22
Smarcd1Q61466 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.7□□□□□ -0.22
Smarcd1Q61466 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.69□□□□□ -0.22
Smarcd1Q61466 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.69□□□□□ -0.22
Smarcd1Q61466 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Smarcd1Q61466 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms