Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Ccne1Q61457 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Gm13875-201ENSMUST00000120162 282 ntBASIC17.05■□□□□ 0.32
Ccne1Q61457 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccne1Q61457 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Gm2546-201ENSMUST00000182630 991 ntBASIC17.05■□□□□ 0.32
Ccne1Q61457 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccne1Q61457 Mir7221-201ENSMUST00000184009 72 ntBASIC17.05■□□□□ 0.32
Ccne1Q61457 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC17.05■□□□□ 0.32
Ccne1Q61457 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccne1Q61457 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccne1Q61457 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.05■□□□□ 0.32
Ccne1Q61457 CT030182.1-201ENSMUST00000225935 533 ntBASIC17.05■□□□□ 0.32
Ccne1Q61457 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.05■□□□□ 0.32
Ccne1Q61457 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.05■□□□□ 0.32
Ccne1Q61457 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.05■□□□□ 0.32
Ccne1Q61457 AC113441.2-201ENSMUST00000221538 1468 ntBASIC17.05■□□□□ 0.32
Ccne1Q61457 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Ccne1Q61457 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Ccne1Q61457 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Ccne1Q61457 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Ccne1Q61457 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC17.04■□□□□ 0.32
Ccne1Q61457 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Gm38092-201ENSMUST00000195600 653 ntBASIC17.04■□□□□ 0.32
Ccne1Q61457 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC17.04■□□□□ 0.32
Ccne1Q61457 Gm45186-201ENSMUST00000206874 478 ntBASIC17.04■□□□□ 0.32
Ccne1Q61457 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC17.04■□□□□ 0.32
Ccne1Q61457 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Ccne1Q61457 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Ccne1Q61457 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.04■□□□□ 0.32
Ccne1Q61457 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Ccne1Q61457 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC17.03■□□□□ 0.32
Ccne1Q61457 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC17.03■□□□□ 0.32
Ccne1Q61457 Gm18916-201ENSMUST00000198264 1246 ntBASIC17.03■□□□□ 0.32
Ccne1Q61457 Gm5363-201ENSMUST00000211927 938 ntBASIC17.03■□□□□ 0.32
Ccne1Q61457 AC155637.1-201ENSMUST00000218560 636 ntBASIC17.03■□□□□ 0.32
Ccne1Q61457 Gm9004-201ENSMUST00000218739 1222 ntBASIC17.03■□□□□ 0.32
Ccne1Q61457 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Ccne1Q61457 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Daam2-202ENSMUST00000224595 1926 ntBASIC17.03■□□□□ 0.32
Ccne1Q61457 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Ccne1Q61457 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Ccne1Q61457 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Ccne1Q61457 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC17.02■□□□□ 0.32
Ccne1Q61457 Gm16505-201ENSMUST00000179981 232 ntBASIC17.02■□□□□ 0.32
Ccne1Q61457 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC17.02■□□□□ 0.32
Ccne1Q61457 Ighv8-10-201ENSMUST00000199579 358 ntBASIC17.02■□□□□ 0.32
Ccne1Q61457 Gm8099-201ENSMUST00000200510 742 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms