Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Ift88Q61371 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
Ift88Q61371 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Ift88Q61371 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Gm8798-201ENSMUST00000211877 1661 ntBASIC14.58□□□□□ -0.08
Ift88Q61371 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Ift88Q61371 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Ift88Q61371 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC14.57□□□□□ -0.08
Ift88Q61371 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Ift88Q61371 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 AC241621.2-201ENSMUST00000223991 2151 ntBASIC14.57□□□□□ -0.08
Ift88Q61371 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.57□□□□□ -0.08
Ift88Q61371 Gm26464-201ENSMUST00000157094 305 ntBASIC14.57□□□□□ -0.08
Ift88Q61371 Gm21854-201ENSMUST00000179901 471 ntBASIC14.57□□□□□ -0.08
Ift88Q61371 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Gm29608-201ENSMUST00000190444 463 ntBASIC14.57□□□□□ -0.08
Ift88Q61371 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Ift88Q61371 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.57□□□□□ -0.08
Ift88Q61371 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Ift88Q61371 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ift88Q61371 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ift88Q61371 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Ift88Q61371 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
Ift88Q61371 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
Ift88Q61371 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.56□□□□□ -0.08
Ift88Q61371 Gm11524-201ENSMUST00000119349 807 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 Gm15376-201ENSMUST00000122258 783 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.56□□□□□ -0.08
Ift88Q61371 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Gm27306-201ENSMUST00000183970 107 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 Gm19078-201ENSMUST00000206311 727 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 AC139382.1-201ENSMUST00000221402 498 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ift88Q61371 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Ift88Q61371 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.56□□□□□ -0.08
Ift88Q61371 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.56□□□□□ -0.08
Ift88Q61371 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Ift88Q61371 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms