Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.6□□□□□ -0.39
Xrcc1Q60596 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.6□□□□□ -0.39
Xrcc1Q60596 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.6□□□□□ -0.39
Xrcc1Q60596 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.6□□□□□ -0.39
Xrcc1Q60596 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm44069-201ENSMUST00000204898 506 ntBASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Xrcc1Q60596 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gm15824-201ENSMUST00000119516 955 ntBASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gm24644-201ENSMUST00000157114 139 ntBASIC12.59□□□□□ -0.39
Xrcc1Q60596 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.59□□□□□ -0.39
Xrcc1Q60596 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.59□□□□□ -0.39
Xrcc1Q60596 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Xrcc1Q60596 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Xrcc1Q60596 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Xrcc1Q60596 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.58□□□□□ -0.4
Xrcc1Q60596 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Xrcc1Q60596 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.58□□□□□ -0.4
Xrcc1Q60596 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Xrcc1Q60596 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms