Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.02□□□□□ -0.16
Shroom1Q5SX79 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Gm7029-201ENSMUST00000173226 450 ntBASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Gm37008-201ENSMUST00000195712 319 ntBASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Gm7172-201ENSMUST00000218047 1152 ntBASIC14.02□□□□□ -0.17
Shroom1Q5SX79 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Shroom1Q5SX79 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Gm42627-201ENSMUST00000197347 224 ntBASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Gm44069-201ENSMUST00000204898 506 ntBASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Gm17383-201ENSMUST00000078739 1041 ntBASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.01□□□□□ -0.17
Shroom1Q5SX79 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14□□□□□ -0.17
Shroom1Q5SX79 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14□□□□□ -0.17
Shroom1Q5SX79 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14□□□□□ -0.17
Shroom1Q5SX79 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14□□□□□ -0.17
Shroom1Q5SX79 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14□□□□□ -0.17
Shroom1Q5SX79 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC14□□□□□ -0.17
Shroom1Q5SX79 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14□□□□□ -0.17
Shroom1Q5SX79 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Shroom1Q5SX79 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14□□□□□ -0.17
Shroom1Q5SX79 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14□□□□□ -0.17
Shroom1Q5SX79 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Shroom1Q5SX79 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms