Protein–RNA interactions for Protein: Q5SWD9

Tsr1, Pre-rRNA-processing protein TSR1 homolog, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsr1Q5SWD9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Gm26474-201ENSMUST00000116762 122 ntBASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Gm15653-201ENSMUST00000119247 907 ntBASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Gm16476-201ENSMUST00000221544 139 ntBASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tsr1Q5SWD9 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Gm13505-201ENSMUST00000121666 817 ntBASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 1600019K03Rik-201ENSMUST00000187829 477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Gm44344-201ENSMUST00000200287 129 ntBASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Dupd1-202ENSMUST00000224735 548 ntBASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tsr1Q5SWD9 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Gm5133-201ENSMUST00000118940 1255 ntBASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Gm37709-201ENSMUST00000195074 600 ntBASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Gm42474-201ENSMUST00000201073 505 ntBASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Shd-206ENSMUST00000225145 998 ntBASIC14.28□□□□□ -0.12
Tsr1Q5SWD9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms