Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm38223-201ENSMUST00000194484 695 ntBASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Trav5d-4Q5R1F6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Trav5d-4Q5R1F6 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Trav5d-4Q5R1F6 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Mir7221-201ENSMUST00000184009 72 ntBASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Gm18307-201ENSMUST00000206864 949 ntBASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav5d-4Q5R1F6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm9947-201ENSMUST00000067599 2920 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm12859-201ENSMUST00000117834 427 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm16342-201ENSMUST00000124025 1025 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Mir6392-201ENSMUST00000184924 108 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm7558-201ENSMUST00000193221 1165 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm37917-201ENSMUST00000194711 392 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm26315-201ENSMUST00000083890 321 ntBASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav5d-4Q5R1F6 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 321.2 ms