Protein–RNA interactions for Protein: Q3V038

Ttc9, Tetratricopeptide repeat protein 9A, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc9Q3V038 Gm2383-201ENSMUST00000181461 807 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Gm27331-201ENSMUST00000183705 60 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Gm27320-201ENSMUST00000184892 109 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Gm26315-201ENSMUST00000083890 321 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.08□□□□□ -0.16
Ttc9Q3V038 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Ttc9Q3V038 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gm12241-201ENSMUST00000118330 726 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Mir7221-201ENSMUST00000184009 72 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gm43133-201ENSMUST00000197472 463 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Rps4l-202ENSMUST00000204242 789 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Olfr284-202ENSMUST00000206647 966 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gm29705-201ENSMUST00000212598 474 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gm18473-201ENSMUST00000220543 868 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gm37795-201ENSMUST00000194216 2459 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.07□□□□□ -0.16
Ttc9Q3V038 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ttc9Q3V038 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.07□□□□□ -0.16
Ttc9Q3V038 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.06□□□□□ -0.16
Ttc9Q3V038 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.06□□□□□ -0.16
Ttc9Q3V038 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC14.06□□□□□ -0.16
Ttc9Q3V038 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.06□□□□□ -0.16
Ttc9Q3V038 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ttc9Q3V038 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.06□□□□□ -0.16
Ttc9Q3V038 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms