Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm28707-201ENSMUST00000186134 558 ntTSL 3 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Shisa3Q3UPR0 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm15653-201ENSMUST00000119247 907 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm12428-201ENSMUST00000119844 727 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm12151-201ENSMUST00000121374 290 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Mir7221-201ENSMUST00000184009 72 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm27680-201ENSMUST00000184192 160 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm27989-201ENSMUST00000184721 107 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm45841-201ENSMUST00000207700 164 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm46209-201ENSMUST00000217912 553 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 AC114573.1-201ENSMUST00000224120 1210 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Gm44292-201ENSMUST00000205194 2364 ntBASIC11.4□□□□□ -0.58
Shisa3Q3UPR0 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa3Q3UPR0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa3Q3UPR0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa3Q3UPR0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa3Q3UPR0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Shisa3Q3UPR0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.39□□□□□ -0.59
Shisa3Q3UPR0 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms