Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm44086-201ENSMUST00000203251 2349 ntBASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Cks1brtQ3UNC9 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm14452-201ENSMUST00000118680 1632 ntBASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm7222-201ENSMUST00000117512 906 ntBASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 AC147366.1-201ENSMUST00000227671 852 ntBASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Cks1brtQ3UNC9 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 CT025626.1-201ENSMUST00000223735 1455 ntBASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC9.41□□□□□ -0.9
Cks1brtQ3UNC9 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms